principal investigators

AstropathAstroPath

PATHOLOGY

Janis Taube, M.D., M.Sc.

Director of Division of Dermatopathology
Professor of Dermatology

Dr. Taube is a pathologist and one of the two PIs for AstroPath. She has developed and validated an approach for pinpointing ~40 immunoactive molecules across large areas of tumor tissue specimens. These maps are imaged using the AstroPath platform and linked through the database to other available data on the specimens and patients, including DNA and RNA-based studies, radiologic images, and clinical data such as treatments received and patient outcomes.

ASTRONOMY / DATA SCIENCE

Alex Szalay, PhD

Bloomberg Distinguished Professor, Director of IDIES

Dr. Szalay—AstroPath’s second PI–is an astrophysicist who led the effort to build a large, open-access, spatially-resolved data portal for the Sloan Digital Sky Survey (SDSS). Drawing from the lessons learned over 25 years working on the SDSS SkyServer, Dr. Szalay has architected a data-management and analysis environment to process, host, and visualize the large-scale tumor-immune maps generated by Dr. Taube’s laboratory. The ability to run analyses of the detailed spatial features over hundreds of millions of cells in the tumor microenvironment enable the discovery of rare phenomena at a high statistical significance.

team members

Taube LabTaube Lab

LoGAN Engle
Dr. Jimenez-Sanchez
Andrew Jorquera
Aleksandra Ogurtsova
Sigfredo Soto-Diaz
Joel Sunshine
Haiying Xu
Libby Will
team members

AstronomyData Science

Joshua Doyle
Margaret Eminizer
Dmitry Medvedev
Melinda NAgy
Jeffrey Roskes
Richard Wilton
team, alumni,
& collaborators

Not Pictured

AstroPath Alumni

Nicholas Giraldo, MD, PhD
Peter Nguyen, MS
Charles Roberts, MS
Jose Loyola
Sahil Hamal

AI/ML Collaborators

Alan Yuille, PhD
Seyoun Park, PhD
Yixiao Zhang

Akoya Collaborators

Cliff Hoyt, MS
Sneha Berry, PhD
Daphne Wang, MS

BKI Collaborators​

Drew Pardoll, MD, PhD
Robert Anders MD, PhD
Suzanne Topalian, MD
Evan Lipson, MD
Luda Danilova, PhD
Leslie Cope, PhD

Cottrell Lab

Tricia Cottrell, MD, PhD

TAube Lab

Julie Stein, MD